WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C45G9.10a.1 Sequence Name  C45G9.10a.1
Length (nt)  2970   Chromosome Location  III: 5056844-5061898
Chromosome . Primary Identifier  III Chromosome Location . Start  5056844
Chromosome Location . End  5061898 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C45G9.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016681 C45G9.10 C45G9.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C45G9.10a C45G9.10a 2916   III: 5056881-5057118

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C45G9.10a.1 5056844 5061898 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87750   275   III: 5056844-5057118 Caenorhabditis elegans
Exon87752   427   III: 5057262-5057688 Caenorhabditis elegans
Exon87754   144   III: 5058079-5058222 Caenorhabditis elegans
Exon87756   287   III: 5058289-5058575 Caenorhabditis elegans
Exon87758   361   III: 5058993-5059353 Caenorhabditis elegans
Exon87761   144   III: 5059772-5059915 Caenorhabditis elegans
Exon87763   287   III: 5060189-5060475 Caenorhabditis elegans
Exon87766   590   III: 5060565-5061154 Caenorhabditis elegans
Exon87767   128   III: 5061199-5061326 Caenorhabditis elegans
Exon87768   162   III: 5061480-5061641 Caenorhabditis elegans
Exon87769   93   III: 5061691-5061783 Caenorhabditis elegans
Exon87770   72   III: 5061827-5061898 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C45G9.10a.1 5056844 5061898 -1

1 Sequence

Length
2970

1 Sequence Ontology Term

Identifier Name Description
transcript