WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54D8.3a Sequence Name  F54D8.3a
Length (nt)  1533   Chromosome Location  III: 5077766-5077858
Chromosome . Primary Identifier  III Chromosome Location . Start  5077766
Chromosome Location . End  5077858
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D8.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29809 ALH-1, isoform a 55.0 510 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00083135
WBRNAi00048325
WBRNAi00015625
WBRNAi00088185
WBRNAi00088308
WBRNAi00005139
WBRNAi00033474
WBRNAi00088052
WBRNAi00088093
WBRNAi00088144
WBRNAi00088226
WBRNAi00088267
WBRNAi00088349
WBRNAi00088390
WBRNAi00083132
WBRNAi00090604

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54D8.3a 5077766 5077858 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000107 alh-1 F54D8.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54D8.3a 5077766 5077858 1
CDS:F54D8.3a 5078571 5078699 1
CDS:F54D8.3a 5078747 5078943 1
CDS:F54D8.3a 5079285 5079562 1
CDS:F54D8.3a 5079609 5080355 1
CDS:F54D8.3a 5080417 5080505 1

1 Sequence

Length
1533

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54D8.3a.1 F54D8.3a.1 1690   III: 5077765-5080661