WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54D8.4a Sequence Name  F54D8.4a
Length (nt)  912   Chromosome Location  III: 5083206-5083349
Chromosome . Primary Identifier  III Chromosome Location . Start  5083206
Chromosome Location . End  5083349
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D8.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51243 CAH-1, isoform a 35.1 303 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00048326
WBRNAi00048327
WBRNAi00015626
WBRNAi00005278
WBRNAi00006831
WBRNAi00103390
WBRNAi00110319

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54D8.4a 5083206 5083349 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000279 cah-1 F54D8.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54D8.4a 5083206 5083349 -1
CDS:F54D8.4a 5083397 5083618 -1
CDS:F54D8.4a 5083670 5083850 -1
CDS:F54D8.4a 5084204 5084316 -1
CDS:F54D8.4a 5085038 5085289 -1

1 Sequence

Length
912

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54D8.4a.1 F54D8.4a.1 1112   III: 5083206-5085629