WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54D8.1.1 Sequence Name  F54D8.1.1
Length (nt)  1111   Chromosome Location  III: 5107330-5108492
Chromosome . Primary Identifier  III Chromosome Location . Start  5107330
Chromosome Location . End  5108492 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001076 dpy-17 F54D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54D8.1 F54D8.1 1059   III: 5107333-5107747

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54D8.1.1 5107330 5108492 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87854   418   III: 5107330-5107747 Caenorhabditis elegans
Exon87855   693   III: 5107800-5108492 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54D8.1.1 5107330 5108492 1

1 Sequence

Length
1111

1 Sequence Ontology Term

Identifier Name Description
transcript