WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10F2.3.1 Sequence Name  T10F2.3.1
Length (nt)  2774   Chromosome Location  III: 5165659-5169799
Chromosome . Primary Identifier  III Chromosome Location . Start  5165659
Chromosome Location . End  5169799 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10F2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006736 ulp-1 T10F2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10F2.3 T10F2.3 2094   III: 5166279-5166446

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10F2.3.1 5165659 5169799 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87951   788   III: 5165659-5166446 Caenorhabditis elegans
Exon87952   79   III: 5166649-5166727 Caenorhabditis elegans
Exon87953   732   III: 5166804-5167535 Caenorhabditis elegans
Exon87954   98   III: 5167584-5167681 Caenorhabditis elegans
Exon87955   153   III: 5167734-5167886 Caenorhabditis elegans
Exon87956   282   III: 5168193-5168474 Caenorhabditis elegans
Exon87957   303   III: 5168522-5168824 Caenorhabditis elegans
Exon87958   137   III: 5169347-5169483 Caenorhabditis elegans
Exon87959   102   III: 5169550-5169651 Caenorhabditis elegans
Exon87960   100   III: 5169700-5169799 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10F2.3.1 5165659 5169799 -1

1 Sequence

Length
2774

1 Sequence Ontology Term

Identifier Name Description
transcript