WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10D2.8.1 Sequence Name  K10D2.8.1
Length (nt)  1067   Chromosome Location  III: 5188726-5190175
Chromosome . Primary Identifier  III Chromosome Location . Start  5188726
Chromosome Location . End  5190175 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10D2.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00189952 K10D2.8 K10D2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10D2.8 K10D2.8 1008   III: 5188737-5188800

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10D2.8.1 5188726 5190175 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87990   75   III: 5188726-5188800 Caenorhabditis elegans
Exon87991   91   III: 5188845-5188935 Caenorhabditis elegans
Exon87992   250   III: 5189131-5189380 Caenorhabditis elegans
Exon87993   369   III: 5189430-5189798 Caenorhabditis elegans
Exon87994   83   III: 5189844-5189926 Caenorhabditis elegans
Exon87995   199   III: 5189977-5190175 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10D2.8.1 5188726 5190175 1

1 Sequence

Length
1067

1 Sequence Ontology Term

Identifier Name Description
transcript