WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10D2.6.1 Sequence Name  K10D2.6.1
Length (nt)  2294   Chromosome Location  III: 5196680-5199677
Chromosome . Primary Identifier  III Chromosome Location . Start  5196680
Chromosome Location . End  5199677 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10D2.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001262 emb-8 K10D2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10D2.6 K10D2.6 1989   III: 5196968-5197195

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10D2.6.1 5196680 5199677 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88024   516   III: 5196680-5197195 Caenorhabditis elegans
Exon88025   297   III: 5197240-5197536 Caenorhabditis elegans
Exon88026   249   III: 5198039-5198287 Caenorhabditis elegans
Exon88027   999   III: 5198335-5199333 Caenorhabditis elegans
Exon88028   94   III: 5199387-5199480 Caenorhabditis elegans
Exon88029   139   III: 5199539-5199677 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10D2.6.1 5196680 5199677 -1

1 Sequence

Length
2294

1 Sequence Ontology Term

Identifier Name Description
transcript