WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10D2.1c.1 Sequence Name  K10D2.1c.1
Length (nt)  1491   Chromosome Location  III: 5193972-5195810
Chromosome . Primary Identifier  III Chromosome Location . Start  5193972
Chromosome Location . End  5195810 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10D2.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019627 hira-1 K10D2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10D2.1c K10D2.1c 1491   III: 5193972-5194660

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10D2.1c.1 5193972 5195810 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88051   689   III: 5193972-5194660 Caenorhabditis elegans
Exon88053   611   III: 5194961-5195571 Caenorhabditis elegans
Exon88054   191   III: 5195620-5195810 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10D2.1c.1 5193972 5195810 1

1 Sequence

Length
1491

1 Sequence Ontology Term

Identifier Name Description
transcript