WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E10.5.1 Sequence Name  C34E10.5.1
Length (nt)  2518   Chromosome Location  III: 5230555-5234507
Chromosome . Primary Identifier  III Chromosome Location . Start  5230555
Chromosome Location . End  5234507 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016408 prmt-5 C34E10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E10.5 C34E10.5 2205   III: 5230579-5230874

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34E10.5.1 5230555 5234507 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88092   320   III: 5230555-5230874 Caenorhabditis elegans
Exon88095   82   III: 5230924-5231005 Caenorhabditis elegans
Exon88098   194   III: 5231099-5231292 Caenorhabditis elegans
Exon88101   282   III: 5231374-5231655 Caenorhabditis elegans
Exon88104   406   III: 5231700-5232105 Caenorhabditis elegans
Exon88107   482   III: 5232383-5232864 Caenorhabditis elegans
Exon88110   172   III: 5233484-5233655 Caenorhabditis elegans
Exon88113   219   III: 5233880-5234098 Caenorhabditis elegans
Exon88117   361   III: 5234147-5234507 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34E10.5.1 5230555 5234507 1

1 Sequence

Length
2518

1 Sequence Ontology Term

Identifier Name Description
transcript