WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E10.5.2 Sequence Name  C34E10.5.2
Length (nt)  2366   Chromosome Location  III: 5230555-5234399
Chromosome . Primary Identifier  III Chromosome Location . Start  5230555
Chromosome Location . End  5234399 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E10.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016408 prmt-5 C34E10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E10.5 C34E10.5 2205   III: 5230579-5230874

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34E10.5.2 5230555 5234399 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88093   320   III: 5230555-5230874 Caenorhabditis elegans
Exon88096   82   III: 5230924-5231005 Caenorhabditis elegans
Exon88099   194   III: 5231099-5231292 Caenorhabditis elegans
Exon88102   282   III: 5231374-5231655 Caenorhabditis elegans
Exon88105   406   III: 5231700-5232105 Caenorhabditis elegans
Exon88108   482   III: 5232383-5232864 Caenorhabditis elegans
Exon88111   172   III: 5233484-5233655 Caenorhabditis elegans
Exon88114   219   III: 5233880-5234098 Caenorhabditis elegans
Exon88116   126   III: 5234147-5234272 Caenorhabditis elegans
Exon88119   83   III: 5234317-5234399 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34E10.5.2 5230555 5234399 1

1 Sequence

Length
2366

1 Sequence Ontology Term

Identifier Name Description
transcript