WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E10.4b.2 Sequence Name  C34E10.4b.2
Length (nt)  2033   Chromosome Location  III: 5236404-5240383
Chromosome . Primary Identifier  III Chromosome Location . Start  5236404
Chromosome Location . End  5240383 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E10.4b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006946 prx-10 C34E10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E10.4b C34E10.4b 1083   III: 5238139-5238189

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34E10.4b.2 5236404 5240383 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88125   120   III: 5236404-5236523 Caenorhabditis elegans
Exon88148   168   III: 5237715-5237882 Caenorhabditis elegans
Exon88155   257   III: 5237933-5238189 Caenorhabditis elegans
Exon88163   210   III: 5238236-5238445 Caenorhabditis elegans
Exon88171   465   III: 5238813-5239277 Caenorhabditis elegans
Exon88179   108   III: 5239398-5239505 Caenorhabditis elegans
Exon88186   156   III: 5239551-5239706 Caenorhabditis elegans
Exon88194   549   III: 5239835-5240383 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34E10.4b.2 5236404 5240383 1

1 Sequence

Length
2033

1 Sequence Ontology Term

Identifier Name Description
transcript