WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E10.4b.1 Sequence Name  C34E10.4b.1
Length (nt)  2065   Chromosome Location  III: 5236892-5240055
Chromosome . Primary Identifier  III Chromosome Location . Start  5236892
Chromosome Location . End  5240055 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E10.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006946 prx-10 C34E10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E10.4b C34E10.4b 1083   III: 5238139-5238189

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34E10.4b.1 5236892 5240055 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88132   100   III: 5236892-5236991 Caenorhabditis elegans
Exon88136   140   III: 5237044-5237183 Caenorhabditis elegans
Exon88141   240   III: 5237234-5237473 Caenorhabditis elegans
Exon88147   168   III: 5237715-5237882 Caenorhabditis elegans
Exon88154   257   III: 5237933-5238189 Caenorhabditis elegans
Exon88162   210   III: 5238236-5238445 Caenorhabditis elegans
Exon88170   465   III: 5238813-5239277 Caenorhabditis elegans
Exon88178   108   III: 5239398-5239505 Caenorhabditis elegans
Exon88185   156   III: 5239551-5239706 Caenorhabditis elegans
Exon88193   221   III: 5239835-5240055 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34E10.4b.1 5236892 5240055 1

1 Sequence

Length
2065

1 Sequence Ontology Term

Identifier Name Description
transcript