WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E10.4a.2 Sequence Name  C34E10.4a.2
Length (nt)  2313   Chromosome Location  III: 5236404-5240055
Chromosome . Primary Identifier  III Chromosome Location . Start  5236404
Chromosome Location . End  5240055 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E10.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006946 prx-10 C34E10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E10.4a C34E10.4a 945   III: 5236431-5236523

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34E10.4a.2 5236404 5240055 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88163   120   III: 5236404-5236523 Caenorhabditis elegans
Exon88168   100   III: 5236892-5236991 Caenorhabditis elegans
Exon88172   140   III: 5237044-5237183 Caenorhabditis elegans
Exon88177   240   III: 5237234-5237473 Caenorhabditis elegans
Exon88183   168   III: 5237715-5237882 Caenorhabditis elegans
Exon88190   257   III: 5237933-5238189 Caenorhabditis elegans
Exon88198   210   III: 5238236-5238445 Caenorhabditis elegans
Exon88206   465   III: 5238813-5239277 Caenorhabditis elegans
Exon88214   108   III: 5239398-5239505 Caenorhabditis elegans
Exon88228   505   III: 5239551-5240055 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34E10.4a.2 5236404 5240055 1

1 Sequence

Length
2313

1 Sequence Ontology Term

Identifier Name Description
transcript