WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E10.4b.3 Sequence Name  C34E10.4b.3
Length (nt)  2310   Chromosome Location  III: 5236890-5240383
Chromosome . Primary Identifier  III Chromosome Location . Start  5236890
Chromosome Location . End  5240383 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E10.4b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006946 prx-10 C34E10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E10.4b C34E10.4b 1083   III: 5238139-5238189

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34E10.4b.3 5236890 5240383 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88165   102   III: 5236890-5236991 Caenorhabditis elegans
Exon88174   140   III: 5237044-5237183 Caenorhabditis elegans
Exon88179   240   III: 5237234-5237473 Caenorhabditis elegans
Exon88188   83   III: 5237800-5237882 Caenorhabditis elegans
Exon88193   257   III: 5237933-5238189 Caenorhabditis elegans
Exon88201   210   III: 5238236-5238445 Caenorhabditis elegans
Exon88209   465   III: 5238813-5239277 Caenorhabditis elegans
Exon88217   108   III: 5239398-5239505 Caenorhabditis elegans
Exon88224   156   III: 5239551-5239706 Caenorhabditis elegans
Exon88232   549   III: 5239835-5240383 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34E10.4b.3 5236890 5240383 1

1 Sequence

Length
2310

1 Sequence Ontology Term

Identifier Name Description
transcript