WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E10.8.1 Sequence Name  C34E10.8.1
Length (nt)  3272   Chromosome Location  III: 5249075-5254187
Chromosome . Primary Identifier  III Chromosome Location . Start  5249075
Chromosome Location . End  5254187 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E10.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016409 sumv-1 C34E10.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E10.8 C34E10.8 3075   III: 5249271-5249347

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34E10.8.1 5249075 5254187 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88202   273   III: 5249075-5249347 Caenorhabditis elegans
Exon88203   103   III: 5249425-5249527 Caenorhabditis elegans
Exon88204   164   III: 5249581-5249744 Caenorhabditis elegans
Exon88205   545   III: 5249820-5250364 Caenorhabditis elegans
Exon88206   255   III: 5250443-5250697 Caenorhabditis elegans
Exon88207   211   III: 5250799-5251009 Caenorhabditis elegans
Exon88208   163   III: 5251057-5251219 Caenorhabditis elegans
Exon88209   188   III: 5251608-5251795 Caenorhabditis elegans
Exon88210   53   III: 5251844-5251896 Caenorhabditis elegans
Exon88211   245   III: 5251942-5252186 Caenorhabditis elegans
Exon88212   69   III: 5252714-5252782 Caenorhabditis elegans
Exon88213   92   III: 5252838-5252929 Caenorhabditis elegans
Exon88214   99   III: 5252979-5253077 Caenorhabditis elegans
Exon88215   172   III: 5253125-5253296 Caenorhabditis elegans
Exon88216   80   III: 5253344-5253423 Caenorhabditis elegans
Exon88217   149   III: 5253473-5253621 Caenorhabditis elegans
Exon88218   93   III: 5253677-5253769 Caenorhabditis elegans
Exon88219   176   III: 5253814-5253989 Caenorhabditis elegans
Exon88220   142   III: 5254046-5254187 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34E10.8.1 5249075 5254187 -1

1 Sequence

Length
3272

1 Sequence Ontology Term

Identifier Name Description
transcript