WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34E10.2.1 Sequence Name  C34E10.2.1
Length (nt)  1196   Chromosome Location  III: 5259023-5260512
Chromosome . Primary Identifier  III Chromosome Location . Start  5259023
Chromosome Location . End  5260512 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34E10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001661 gop-2 C34E10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34E10.2 C34E10.2 1068   III: 5259033-5259176

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34E10.2.1 5259023 5260512 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88237   154   III: 5259023-5259176 Caenorhabditis elegans
Exon88238   336   III: 5259224-5259559 Caenorhabditis elegans
Exon88239   277   III: 5259722-5259998 Caenorhabditis elegans
Exon88240   161   III: 5260042-5260202 Caenorhabditis elegans
Exon88241   268   III: 5260245-5260512 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34E10.2.1 5259023 5260512 1

1 Sequence

Length
1196

1 Sequence Ontology Term

Identifier Name Description
transcript