WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC395.8.1 Sequence Name  ZC395.8.1
Length (nt)  2310   Chromosome Location  III: 5268755-5273471
Chromosome . Primary Identifier  III Chromosome Location . Start  5268755
Chromosome Location . End  5273471 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC395.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022598 ztf-8 ZC395.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC395.8 ZC395.8 2064   III: 5268999-5269302

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC395.8.1 5268755 5273471 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88272   548   III: 5268755-5269302 Caenorhabditis elegans
Exon88273   165   III: 5269767-5269931 Caenorhabditis elegans
Exon88284   317   III: 5271045-5271361 Caenorhabditis elegans
Exon88285   75   III: 5271471-5271545 Caenorhabditis elegans
Exon88286   144   III: 5271590-5271733 Caenorhabditis elegans
Exon88287   201   III: 5271801-5272001 Caenorhabditis elegans
Exon88288   83   III: 5272391-5272473 Caenorhabditis elegans
Exon88289   308   III: 5272521-5272828 Caenorhabditis elegans
Exon88290   287   III: 5272905-5273191 Caenorhabditis elegans
Exon88291   100   III: 5273240-5273339 Caenorhabditis elegans
Exon88292   82   III: 5273390-5273471 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC395.8.1 5268755 5273471 -1

1 Sequence

Length
2310

1 Sequence Ontology Term

Identifier Name Description
transcript