WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y32H12A.2a Sequence Name  Y32H12A.2a
Length (nt)  1794   Chromosome Location  III: 5346303-5346507
Chromosome . Primary Identifier  III Chromosome Location . Start  5346303
Chromosome Location . End  5346507
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y32H12A.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43676 THOC-5, isoform a 68.3 597 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00055805
WBRNAi00083740
WBRNAi00020187
WBRNAi00006989
WBRNAi00036758
WBRNAi00083633
WBRNAi00083855
WBRNAi00061920

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y32H12A.2a 5346303 5346507 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021311 thoc-5 Y32H12A.2 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y32H12A.2a 5346303 5346507 -1
CDS:Y32H12A.2a 5346758 5347120 -1
CDS:Y32H12A.2a 5347500 5347881 -1
CDS:Y32H12A.2a 5348376 5348635 -1
CDS:Y32H12A.2a 5348681 5349018 -1
CDS:Y32H12A.2a 5349068 5349187 -1
CDS:Y32H12A.2a 5349235 5349360 -1

1 Sequence

Length
1794

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y32H12A.2a.1 Y32H12A.2a.1 1878   III: 5346226-5349367