WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y32H12A.8b.1 Sequence Name  Y32H12A.8b.1
Length (nt)  11049   Chromosome Location  III: 5385489-5406037
Chromosome . Primary Identifier  III Chromosome Location . Start  5385489
Chromosome Location . End  5406037 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y32H12A.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021316 Y32H12A.8 Y32H12A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y32H12A.8b Y32H12A.8b 10656   III: 5385838-5385906

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y32H12A.8b.1 5385489 5406037 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

39 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88610   418   III: 5385489-5385906 Caenorhabditis elegans
Exon88618   639   III: 5386049-5386687 Caenorhabditis elegans
Exon88624   351   III: 5386844-5387194 Caenorhabditis elegans
Exon88628   116   III: 5387347-5387462 Caenorhabditis elegans
Exon88634   84   III: 5387568-5387651 Caenorhabditis elegans
Exon88638   259   III: 5388118-5388376 Caenorhabditis elegans
Exon88644   199   III: 5388437-5388635 Caenorhabditis elegans
Exon88650   137   III: 5388693-5388829 Caenorhabditis elegans
Exon88656   258   III: 5388884-5389141 Caenorhabditis elegans
Exon88662   1056   III: 5389429-5390484 Caenorhabditis elegans
Exon88668   150   III: 5390615-5390764 Caenorhabditis elegans
Exon88674   341   III: 5391071-5391411 Caenorhabditis elegans
Exon88680   749   III: 5391520-5392268 Caenorhabditis elegans
Exon88686   107   III: 5392412-5392518 Caenorhabditis elegans
Exon88692   350   III: 5392621-5392970 Caenorhabditis elegans
Exon88698   76   III: 5393016-5393091 Caenorhabditis elegans
Exon88704   721   III: 5393397-5394117 Caenorhabditis elegans
Exon88711   219   III: 5394247-5394465 Caenorhabditis elegans
Exon88717   75   III: 5394518-5394592 Caenorhabditis elegans
Exon88723   143   III: 5394807-5394949 Caenorhabditis elegans
Exon88727   411   III: 5394996-5395406 Caenorhabditis elegans
Exon88733   42   III: 5396148-5396189 Caenorhabditis elegans
Exon88739   393   III: 5396469-5396861 Caenorhabditis elegans
Exon88745   1085   III: 5397340-5398424 Caenorhabditis elegans
Exon88751   236   III: 5398544-5398779 Caenorhabditis elegans
Exon88757   190   III: 5399157-5399346 Caenorhabditis elegans
Exon88763   216   III: 5399652-5399867 Caenorhabditis elegans
Exon88769   110   III: 5399919-5400028 Caenorhabditis elegans
Exon88775   330   III: 5400135-5400464 Caenorhabditis elegans
Exon88781   452   III: 5400746-5401197 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y32H12A.8b.1 5385489 5406037 -1

1 Sequence

Length
11049

1 Sequence Ontology Term

Identifier Name Description
transcript