WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y32H12A.8a.1 Sequence Name  Y32H12A.8a.1
Length (nt)  11878   Chromosome Location  III: 5385513-5404985
Chromosome . Primary Identifier  III Chromosome Location . Start  5385513
Chromosome Location . End  5404985 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y32H12A.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021316 Y32H12A.8 Y32H12A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y32H12A.8a Y32H12A.8a 11550   III: 5385838-5385906

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y32H12A.8a.1 5385513 5404985 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

35 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88611   394   III: 5385513-5385906 Caenorhabditis elegans
Exon88616   639   III: 5386049-5386687 Caenorhabditis elegans
Exon88622   351   III: 5386844-5387194 Caenorhabditis elegans
Exon88632   305   III: 5387347-5387651 Caenorhabditis elegans
Exon88642   518   III: 5388118-5388635 Caenorhabditis elegans
Exon88648   137   III: 5388693-5388829 Caenorhabditis elegans
Exon88654   258   III: 5388884-5389141 Caenorhabditis elegans
Exon88660   1056   III: 5389429-5390484 Caenorhabditis elegans
Exon88666   150   III: 5390615-5390764 Caenorhabditis elegans
Exon88672   341   III: 5391071-5391411 Caenorhabditis elegans
Exon88678   749   III: 5391520-5392268 Caenorhabditis elegans
Exon88684   107   III: 5392412-5392518 Caenorhabditis elegans
Exon88690   350   III: 5392621-5392970 Caenorhabditis elegans
Exon88696   76   III: 5393016-5393091 Caenorhabditis elegans
Exon88702   721   III: 5393397-5394117 Caenorhabditis elegans
Exon88709   219   III: 5394247-5394465 Caenorhabditis elegans
Exon88715   75   III: 5394518-5394592 Caenorhabditis elegans
Exon88721   143   III: 5394807-5394949 Caenorhabditis elegans
Exon88731   1194   III: 5394996-5396189 Caenorhabditis elegans
Exon88737   393   III: 5396469-5396861 Caenorhabditis elegans
Exon88743   1085   III: 5397340-5398424 Caenorhabditis elegans
Exon88749   236   III: 5398544-5398779 Caenorhabditis elegans
Exon88755   190   III: 5399157-5399346 Caenorhabditis elegans
Exon88761   216   III: 5399652-5399867 Caenorhabditis elegans
Exon88767   110   III: 5399919-5400028 Caenorhabditis elegans
Exon88773   330   III: 5400135-5400464 Caenorhabditis elegans
Exon88779   452   III: 5400746-5401197 Caenorhabditis elegans
Exon88785   179   III: 5401596-5401774 Caenorhabditis elegans
Exon88791   115   III: 5402003-5402117 Caenorhabditis elegans
Exon88797   109   III: 5402166-5402274 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y32H12A.8a.1 5385513 5404985 -1

1 Sequence

Length
11878

1 Sequence Ontology Term

Identifier Name Description
transcript