WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y32H12A.8a.2 Sequence Name  Y32H12A.8a.2
Length (nt)  11919   Chromosome Location  III: 5385513-5406037
Chromosome . Primary Identifier  III Chromosome Location . Start  5385513
Chromosome Location . End  5406037 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y32H12A.8a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021316 Y32H12A.8 Y32H12A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y32H12A.8a Y32H12A.8a 11550   III: 5385838-5385906

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y32H12A.8a.2 5385513 5406037 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

36 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88612   394   III: 5385513-5385906 Caenorhabditis elegans
Exon88617   639   III: 5386049-5386687 Caenorhabditis elegans
Exon88623   351   III: 5386844-5387194 Caenorhabditis elegans
Exon88633   305   III: 5387347-5387651 Caenorhabditis elegans
Exon88643   518   III: 5388118-5388635 Caenorhabditis elegans
Exon88649   137   III: 5388693-5388829 Caenorhabditis elegans
Exon88655   258   III: 5388884-5389141 Caenorhabditis elegans
Exon88661   1056   III: 5389429-5390484 Caenorhabditis elegans
Exon88667   150   III: 5390615-5390764 Caenorhabditis elegans
Exon88673   341   III: 5391071-5391411 Caenorhabditis elegans
Exon88679   749   III: 5391520-5392268 Caenorhabditis elegans
Exon88685   107   III: 5392412-5392518 Caenorhabditis elegans
Exon88691   350   III: 5392621-5392970 Caenorhabditis elegans
Exon88697   76   III: 5393016-5393091 Caenorhabditis elegans
Exon88703   721   III: 5393397-5394117 Caenorhabditis elegans
Exon88710   219   III: 5394247-5394465 Caenorhabditis elegans
Exon88716   75   III: 5394518-5394592 Caenorhabditis elegans
Exon88722   143   III: 5394807-5394949 Caenorhabditis elegans
Exon88732   1194   III: 5394996-5396189 Caenorhabditis elegans
Exon88738   393   III: 5396469-5396861 Caenorhabditis elegans
Exon88744   1085   III: 5397340-5398424 Caenorhabditis elegans
Exon88750   236   III: 5398544-5398779 Caenorhabditis elegans
Exon88756   190   III: 5399157-5399346 Caenorhabditis elegans
Exon88762   216   III: 5399652-5399867 Caenorhabditis elegans
Exon88768   110   III: 5399919-5400028 Caenorhabditis elegans
Exon88774   330   III: 5400135-5400464 Caenorhabditis elegans
Exon88780   452   III: 5400746-5401197 Caenorhabditis elegans
Exon88786   179   III: 5401596-5401774 Caenorhabditis elegans
Exon88792   115   III: 5402003-5402117 Caenorhabditis elegans
Exon88798   109   III: 5402166-5402274 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y32H12A.8a.2 5385513 5406037 -1

1 Sequence

Length
11919

1 Sequence Ontology Term

Identifier Name Description
transcript