WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y32H12A.8c.1 Sequence Name  Y32H12A.8c.1
Length (nt)  10656   Chromosome Location  III: 5385838-5406005
Chromosome . Primary Identifier  III Chromosome Location . Start  5385838
Chromosome Location . End  5406005 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y32H12A.8c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021316 Y32H12A.8 Y32H12A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y32H12A.8c Y32H12A.8c 10656   III: 5385838-5385906

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y32H12A.8c.1 5385838 5406005 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

39 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88614   69   III: 5385838-5385906 Caenorhabditis elegans
Exon88619   639   III: 5386049-5386687 Caenorhabditis elegans
Exon88625   351   III: 5386844-5387194 Caenorhabditis elegans
Exon88629   116   III: 5387347-5387462 Caenorhabditis elegans
Exon88635   84   III: 5387568-5387651 Caenorhabditis elegans
Exon88639   259   III: 5388118-5388376 Caenorhabditis elegans
Exon88645   199   III: 5388437-5388635 Caenorhabditis elegans
Exon88651   137   III: 5388693-5388829 Caenorhabditis elegans
Exon88657   258   III: 5388884-5389141 Caenorhabditis elegans
Exon88663   1056   III: 5389429-5390484 Caenorhabditis elegans
Exon88669   150   III: 5390615-5390764 Caenorhabditis elegans
Exon88675   341   III: 5391071-5391411 Caenorhabditis elegans
Exon88681   749   III: 5391520-5392268 Caenorhabditis elegans
Exon88687   107   III: 5392412-5392518 Caenorhabditis elegans
Exon88693   350   III: 5392621-5392970 Caenorhabditis elegans
Exon88699   76   III: 5393016-5393091 Caenorhabditis elegans
Exon88705   721   III: 5393397-5394117 Caenorhabditis elegans
Exon88712   219   III: 5394247-5394465 Caenorhabditis elegans
Exon88718   75   III: 5394518-5394592 Caenorhabditis elegans
Exon88724   143   III: 5394807-5394949 Caenorhabditis elegans
Exon88728   411   III: 5394996-5395406 Caenorhabditis elegans
Exon88734   42   III: 5396148-5396189 Caenorhabditis elegans
Exon88740   393   III: 5396469-5396861 Caenorhabditis elegans
Exon88746   1085   III: 5397340-5398424 Caenorhabditis elegans
Exon88752   236   III: 5398544-5398779 Caenorhabditis elegans
Exon88758   190   III: 5399157-5399346 Caenorhabditis elegans
Exon88764   216   III: 5399652-5399867 Caenorhabditis elegans
Exon88770   110   III: 5399919-5400028 Caenorhabditis elegans
Exon88776   330   III: 5400135-5400464 Caenorhabditis elegans
Exon88782   452   III: 5400746-5401197 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y32H12A.8c.1 5385838 5406005 -1

1 Sequence

Length
10656

1 Sequence Ontology Term

Identifier Name Description
transcript