WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y32H12A.8d.1 Sequence Name  Y32H12A.8d.1
Length (nt)  10668   Chromosome Location  III: 5385838-5406005
Chromosome . Primary Identifier  III Chromosome Location . Start  5385838
Chromosome Location . End  5406005 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y32H12A.8d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021316 Y32H12A.8 Y32H12A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y32H12A.8d Y32H12A.8d 10668   III: 5385838-5385906

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y32H12A.8d.1 5385838 5406005 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

39 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88615   69   III: 5385838-5385906 Caenorhabditis elegans
Exon88620   639   III: 5386049-5386687 Caenorhabditis elegans
Exon88626   351   III: 5386844-5387194 Caenorhabditis elegans
Exon88630   116   III: 5387347-5387462 Caenorhabditis elegans
Exon88636   84   III: 5387568-5387651 Caenorhabditis elegans
Exon88640   259   III: 5388118-5388376 Caenorhabditis elegans
Exon88646   199   III: 5388437-5388635 Caenorhabditis elegans
Exon88652   137   III: 5388693-5388829 Caenorhabditis elegans
Exon88658   258   III: 5388884-5389141 Caenorhabditis elegans
Exon88664   1056   III: 5389429-5390484 Caenorhabditis elegans
Exon88670   150   III: 5390615-5390764 Caenorhabditis elegans
Exon88676   341   III: 5391071-5391411 Caenorhabditis elegans
Exon88682   749   III: 5391520-5392268 Caenorhabditis elegans
Exon88688   107   III: 5392412-5392518 Caenorhabditis elegans
Exon88694   350   III: 5392621-5392970 Caenorhabditis elegans
Exon88700   76   III: 5393016-5393091 Caenorhabditis elegans
Exon88706   721   III: 5393397-5394117 Caenorhabditis elegans
Exon88713   219   III: 5394247-5394465 Caenorhabditis elegans
Exon88719   75   III: 5394518-5394592 Caenorhabditis elegans
Exon88725   143   III: 5394807-5394949 Caenorhabditis elegans
Exon88729   411   III: 5394996-5395406 Caenorhabditis elegans
Exon88735   42   III: 5396148-5396189 Caenorhabditis elegans
Exon88741   393   III: 5396469-5396861 Caenorhabditis elegans
Exon88747   1085   III: 5397340-5398424 Caenorhabditis elegans
Exon88753   236   III: 5398544-5398779 Caenorhabditis elegans
Exon88759   190   III: 5399157-5399346 Caenorhabditis elegans
Exon88765   216   III: 5399652-5399867 Caenorhabditis elegans
Exon88771   110   III: 5399919-5400028 Caenorhabditis elegans
Exon88777   330   III: 5400135-5400464 Caenorhabditis elegans
Exon88783   452   III: 5400746-5401197 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y32H12A.8d.1 5385838 5406005 -1

1 Sequence

Length
10668

1 Sequence Ontology Term

Identifier Name Description
transcript