WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W03A5.6a Sequence Name  W03A5.6a
Length (nt)  1833   Chromosome Location  III: 5431978-5432088
Chromosome . Primary Identifier  III Chromosome Location . Start  5431978
Chromosome Location . End  5432088
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03A5.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51961 DLGR-1, isoform a 66.8 610 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00054646
WBRNAi00054647
WBRNAi00054648
WBRNAi00054649
WBRNAi00054650
WBRNAi00019533
WBRNAi00019534
WBRNAi00019535
WBRNAi00005259
WBRNAi00005270
WBRNAi00005747
WBRNAi00005806
WBRNAi00006776
WBRNAi00036213
WBRNAi00036214
WBRNAi00024200

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W03A5.6a 5431978 5432088 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020970 dlgr-1 W03A5.6 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:W03A5.6a 5431978 5432088 -1
CDS:W03A5.6a 5432428 5432700 -1
CDS:W03A5.6a 5433185 5433586 -1
CDS:W03A5.6a 5434045 5434249 -1
CDS:W03A5.6a 5438845 5438955 -1
CDS:W03A5.6a 5439288 5439365 -1
CDS:W03A5.6a 5439419 5439588 -1
CDS:W03A5.6a 5439654 5439760 -1
CDS:W03A5.6a 5439868 5439928 -1
CDS:W03A5.6a 5440112 5440209 -1
CDS:W03A5.6a 5440257 5440360 -1
CDS:W03A5.6a 5440520 5440632 -1

1 Sequence

Length
1833

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W03A5.6a.1 W03A5.6a.1 2440   III: 5431379-5440640