WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03A5.6b.1 Sequence Name  W03A5.6b.1
Length (nt)  2437   Chromosome Location  III: 5431382-5440634
Chromosome . Primary Identifier  III Chromosome Location . Start  5431382
Chromosome Location . End  5440634 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03A5.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020970 dlgr-1 W03A5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03A5.6b W03A5.6b 1839   III: 5431978-5432088

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03A5.6b.1 5431382 5440634 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88869   707   III: 5431382-5432088 Caenorhabditis elegans
Exon88872   273   III: 5432428-5432700 Caenorhabditis elegans
Exon88875   402   III: 5433185-5433586 Caenorhabditis elegans
Exon88879   205   III: 5434045-5434249 Caenorhabditis elegans
Exon88881   111   III: 5438845-5438955 Caenorhabditis elegans
Exon88883   78   III: 5439288-5439365 Caenorhabditis elegans
Exon88885   170   III: 5439419-5439588 Caenorhabditis elegans
Exon88887   107   III: 5439654-5439760 Caenorhabditis elegans
Exon88889   61   III: 5439868-5439928 Caenorhabditis elegans
Exon88891   104   III: 5440112-5440215 Caenorhabditis elegans
Exon88893   104   III: 5440257-5440360 Caenorhabditis elegans
Exon88894   115   III: 5440520-5440634 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03A5.6b.1 5431382 5440634 -1

1 Sequence

Length
2437

1 Sequence Ontology Term

Identifier Name Description
transcript