WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R02F2.7.1 Sequence Name  R02F2.7.1
Length (nt)  2176   Chromosome Location  III: 5480303-5483773
Chromosome . Primary Identifier  III Chromosome Location . Start  5480303
Chromosome Location . End  5483773 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02F2.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019836 R02F2.7 R02F2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R02F2.7 R02F2.7 2082   III: 5480397-5480585

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R02F2.7.1 5480303 5483773 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88951   283   III: 5480303-5480585 Caenorhabditis elegans
Exon88952   476   III: 5481401-5481876 Caenorhabditis elegans
Exon88953   458   III: 5481938-5482395 Caenorhabditis elegans
Exon88954   143   III: 5482537-5482679 Caenorhabditis elegans
Exon88955   111   III: 5482726-5482836 Caenorhabditis elegans
Exon88956   224   III: 5482883-5483106 Caenorhabditis elegans
Exon88957   134   III: 5483154-5483287 Caenorhabditis elegans
Exon88958   128   III: 5483335-5483462 Caenorhabditis elegans
Exon88959   98   III: 5483511-5483608 Caenorhabditis elegans
Exon88960   121   III: 5483653-5483773 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R02F2.7.1 5480303 5483773 -1

1 Sequence

Length
2176

1 Sequence Ontology Term

Identifier Name Description
transcript