WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R02F2.2.1 Sequence Name  R02F2.2.1
Length (nt)  3718   Chromosome Location  III: 5487553-5498958
Chromosome . Primary Identifier  III Chromosome Location . Start  5487553
Chromosome Location . End  5498958 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02F2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019832 osg-1 R02F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R02F2.2 R02F2.2 3549   III: 5487642-5487769

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R02F2.2.1 5487553 5498958 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88965   217   III: 5487553-5487769 Caenorhabditis elegans
Exon88966   163   III: 5489184-5489346 Caenorhabditis elegans
Exon88967   72   III: 5489402-5489473 Caenorhabditis elegans
Exon88968   422   III: 5489652-5490073 Caenorhabditis elegans
Exon88969   358   III: 5490251-5490608 Caenorhabditis elegans
Exon88970   183   III: 5490650-5490832 Caenorhabditis elegans
Exon88971   114   III: 5490913-5491026 Caenorhabditis elegans
Exon88972   261   III: 5491075-5491335 Caenorhabditis elegans
Exon88973   146   III: 5492539-5492684 Caenorhabditis elegans
Exon88974   196   III: 5492728-5492923 Caenorhabditis elegans
Exon88983   119   III: 5496404-5496522 Caenorhabditis elegans
Exon88984   166   III: 5496566-5496731 Caenorhabditis elegans
Exon88985   188   III: 5496965-5497152 Caenorhabditis elegans
Exon88986   475   III: 5497196-5497670 Caenorhabditis elegans
Exon88987   328   III: 5497740-5498067 Caenorhabditis elegans
Exon88988   128   III: 5498310-5498437 Caenorhabditis elegans
Exon88989   182   III: 5498777-5498958 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R02F2.2.1 5487553 5498958 1

1 Sequence

Length
3718

1 Sequence Ontology Term

Identifier Name Description
transcript