WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R02F2.2.1 Sequence Name  R02F2.2.1
Length (nt)  3718   Chromosome Location  III: 5487553-5498958
Chromosome . Primary Identifier  III Chromosome Location . Start  5487553
Chromosome Location . End  5498958 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02F2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019832 osg-1 R02F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R02F2.2 R02F2.2 3549   III: 5487642-5487769

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R02F2.2.1 5487553 5498958 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89002   217   III: 5487553-5487769 Caenorhabditis elegans
Exon89003   163   III: 5489184-5489346 Caenorhabditis elegans
Exon89004   72   III: 5489402-5489473 Caenorhabditis elegans
Exon89005   422   III: 5489652-5490073 Caenorhabditis elegans
Exon89006   358   III: 5490251-5490608 Caenorhabditis elegans
Exon89007   183   III: 5490650-5490832 Caenorhabditis elegans
Exon89008   114   III: 5490913-5491026 Caenorhabditis elegans
Exon89009   261   III: 5491075-5491335 Caenorhabditis elegans
Exon89010   146   III: 5492539-5492684 Caenorhabditis elegans
Exon89011   196   III: 5492728-5492923 Caenorhabditis elegans
Exon89020   119   III: 5496404-5496522 Caenorhabditis elegans
Exon89021   166   III: 5496566-5496731 Caenorhabditis elegans
Exon89022   188   III: 5496965-5497152 Caenorhabditis elegans
Exon89023   475   III: 5497196-5497670 Caenorhabditis elegans
Exon89024   328   III: 5497740-5498067 Caenorhabditis elegans
Exon89025   128   III: 5498310-5498437 Caenorhabditis elegans
Exon89026   182   III: 5498777-5498958 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R02F2.2.1 5487553 5498958 1

1 Sequence

Length
3718

1 Sequence Ontology Term

Identifier Name Description
transcript