WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1044.2b.1 Sequence Name  D1044.2b.1
Length (nt)  3854   Chromosome Location  III: 5527745-5535507
Chromosome . Primary Identifier  III Chromosome Location . Start  5527745
Chromosome Location . End  5535507 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1044.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017028 dex-1 D1044.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1044.2b D1044.2b 3228   III: 5527756-5527956

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1044.2b.1 5527745 5535507 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89047   212   III: 5527745-5527956 Caenorhabditis elegans
Exon89051   147   III: 5528443-5528589 Caenorhabditis elegans
Exon89054   148   III: 5528636-5528783 Caenorhabditis elegans
Exon89057   131   III: 5528829-5528959 Caenorhabditis elegans
Exon89060   96   III: 5529477-5529572 Caenorhabditis elegans
Exon89063   181   III: 5530055-5530235 Caenorhabditis elegans
Exon89066   270   III: 5530310-5530579 Caenorhabditis elegans
Exon89069   509   III: 5530754-5531262 Caenorhabditis elegans
Exon89072   720   III: 5531597-5532316 Caenorhabditis elegans
Exon89075   174   III: 5532515-5532688 Caenorhabditis elegans
Exon89078   379   III: 5532745-5533123 Caenorhabditis elegans
Exon89081   245   III: 5533524-5533768 Caenorhabditis elegans
Exon89085   642   III: 5534866-5535507 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1044.2b.1 5527745 5535507 1

1 Sequence

Length
3854

1 Sequence Ontology Term

Identifier Name Description
transcript