WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1044.2b.1 Sequence Name  D1044.2b.1
Length (nt)  3854   Chromosome Location  III: 5527745-5535507
Chromosome . Primary Identifier  III Chromosome Location . Start  5527745
Chromosome Location . End  5535507 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1044.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017028 dex-1 D1044.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1044.2b D1044.2b 3228   III: 5527756-5527956

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1044.2b.1 5527745 5535507 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89084   212   III: 5527745-5527956 Caenorhabditis elegans
Exon89088   147   III: 5528443-5528589 Caenorhabditis elegans
Exon89091   148   III: 5528636-5528783 Caenorhabditis elegans
Exon89094   131   III: 5528829-5528959 Caenorhabditis elegans
Exon89097   96   III: 5529477-5529572 Caenorhabditis elegans
Exon89100   181   III: 5530055-5530235 Caenorhabditis elegans
Exon89103   270   III: 5530310-5530579 Caenorhabditis elegans
Exon89106   509   III: 5530754-5531262 Caenorhabditis elegans
Exon89109   720   III: 5531597-5532316 Caenorhabditis elegans
Exon89112   174   III: 5532515-5532688 Caenorhabditis elegans
Exon89115   379   III: 5532745-5533123 Caenorhabditis elegans
Exon89118   245   III: 5533524-5533768 Caenorhabditis elegans
Exon89122   642   III: 5534866-5535507 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1044.2b.1 5527745 5535507 1

1 Sequence

Length
3854

1 Sequence Ontology Term

Identifier Name Description
transcript