WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1044.2a.1 Sequence Name  D1044.2a.1
Length (nt)  3519   Chromosome Location  III: 5527748-5535501
Chromosome . Primary Identifier  III Chromosome Location . Start  5527748
Chromosome Location . End  5535501 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1044.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017028 dex-1 D1044.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1044.2a D1044.2a 3246   III: 5527756-5527956

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1044.2a.1 5527748 5535501 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89086   209   III: 5527748-5527956 Caenorhabditis elegans
Exon89087   147   III: 5528443-5528589 Caenorhabditis elegans
Exon89090   148   III: 5528636-5528783 Caenorhabditis elegans
Exon89093   131   III: 5528829-5528959 Caenorhabditis elegans
Exon89096   96   III: 5529477-5529572 Caenorhabditis elegans
Exon89099   181   III: 5530055-5530235 Caenorhabditis elegans
Exon89102   270   III: 5530310-5530579 Caenorhabditis elegans
Exon89105   509   III: 5530754-5531262 Caenorhabditis elegans
Exon89108   720   III: 5531597-5532316 Caenorhabditis elegans
Exon89111   174   III: 5532515-5532688 Caenorhabditis elegans
Exon89114   379   III: 5532745-5533123 Caenorhabditis elegans
Exon89117   245   III: 5533524-5533768 Caenorhabditis elegans
Exon89123   310   III: 5535192-5535501 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1044.2a.1 5527748 5535501 1

1 Sequence

Length
3519

1 Sequence Ontology Term

Identifier Name Description
transcript