WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1044.6.1 Sequence Name  D1044.6.1
Length (nt)  3606   Chromosome Location  III: 5535660-5543177
Chromosome . Primary Identifier  III Chromosome Location . Start  5535660
Chromosome Location . End  5543177 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1044.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017031 D1044.6 D1044.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1044.6 D1044.6 3021   III: 5536203-5536324

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1044.6.1 5535660 5543177 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89124   665   III: 5535660-5536324 Caenorhabditis elegans
Exon89125   202   III: 5536523-5536724 Caenorhabditis elegans
Exon89126   308   III: 5536889-5537196 Caenorhabditis elegans
Exon89127   483   III: 5537339-5537821 Caenorhabditis elegans
Exon89128   348   III: 5537896-5538243 Caenorhabditis elegans
Exon89129   71   III: 5538293-5538363 Caenorhabditis elegans
Exon89130   840   III: 5538744-5539583 Caenorhabditis elegans
Exon89131   106   III: 5539809-5539914 Caenorhabditis elegans
Exon89132   260   III: 5539962-5540221 Caenorhabditis elegans
Exon89133   199   III: 5540447-5540645 Caenorhabditis elegans
Exon89134   70   III: 5540692-5540761 Caenorhabditis elegans
Exon89135   54   III: 5543124-5543177 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1044.6.1 5535660 5543177 -1

1 Sequence

Length
3606

1 Sequence Ontology Term

Identifier Name Description
transcript