WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09F7.7a.1 Sequence Name  F09F7.7a.1
Length (nt)  974   Chromosome Location  III: 5553489-5554934
Chromosome . Primary Identifier  III Chromosome Location . Start  5553489
Chromosome Location . End  5554934 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09F7.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017304 nmad-1 F09F7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09F7.7a F09F7.7a 876   III: 5553569-5553854

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09F7.7a.1 5553489 5554934 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89142   366   III: 5553489-5553854 Caenorhabditis elegans
Exon89144   230   III: 5554164-5554393 Caenorhabditis elegans
Exon89145   158   III: 5554439-5554596 Caenorhabditis elegans
Exon89147   85   III: 5554644-5554728 Caenorhabditis elegans
Exon89150   135   III: 5554800-5554934 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09F7.7a.1 5553489 5554934 -1

1 Sequence

Length
974

1 Sequence Ontology Term

Identifier Name Description
transcript