WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09F7.7b.1 Sequence Name  F09F7.7b.1
Length (nt)  627   Chromosome Location  III: 5554127-5554916
Chromosome . Primary Identifier  III Chromosome Location . Start  5554127
Chromosome Location . End  5554916 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09F7.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017304 nmad-1 F09F7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09F7.7b F09F7.7b 627   III: 5554127-5554393

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09F7.7b.1 5554127 5554916 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89143   267   III: 5554127-5554393 Caenorhabditis elegans
Exon89146   158   III: 5554439-5554596 Caenorhabditis elegans
Exon89148   85   III: 5554644-5554728 Caenorhabditis elegans
Exon89149   117   III: 5554800-5554916 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09F7.7b.1 5554127 5554916 -1

1 Sequence

Length
627

1 Sequence Ontology Term

Identifier Name Description
transcript