WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D2.8.2 Sequence Name  F56D2.8.2
Length (nt)  652   Chromosome Location  III: 5581582-5582411
Chromosome . Primary Identifier  III Chromosome Location . Start  5581582
Chromosome Location . End  5582411 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D2.8.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018968 F56D2.8 F56D2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D2.8 F56D2.8 402   III: 5581888-5581935

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56D2.8.2 5581582 5582411 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89233   226   III: 5581582-5581807 Caenorhabditis elegans
Exon89235   72   III: 5581864-5581935 Caenorhabditis elegans
Exon89237   176   III: 5582013-5582188 Caenorhabditis elegans
Exon89238   178   III: 5582234-5582411 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56D2.8.2 5581582 5582411 -1

1 Sequence

Length
652

1 Sequence Ontology Term

Identifier Name Description
transcript