WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F56D2.6a Sequence Name  F56D2.6a
Length (nt)  2220   Chromosome Location  III: 5589279-5589396
Chromosome . Primary Identifier  III Chromosome Location . Start  5589279
Chromosome Location . End  5589396
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D2.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01334 DDX-15, isoform a 84.4 739 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00048705
WBRNAi00048706
WBRNAi00075268
WBRNAi00008880
WBRNAi00083562
WBRNAi00111481
WBRNAi00083598
WBRNAi00083703
WBRNAi00083792
WBRNAi00075514
WBRNAi00032958
WBRNAi00005281
WBRNAi00007189
WBRNAi00071282
WBRNAi00075269
WBRNAi00025707
WBRNAi00080044
WBRNAi00111484
WBRNAi00080132
WBRNAi00069354
WBRNAi00069355
WBRNAi00083540

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F56D2.6a 5589279 5589396 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018967 ddx-15 F56D2.6 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F56D2.6a 5589279 5589396 -1
CDS:F56D2.6a 5589451 5589811 -1
CDS:F56D2.6a 5589864 5591451 -1
CDS:F56D2.6a 5591499 5591595 -1
CDS:F56D2.6a 5591651 5591706 -1

1 Sequence

Length
2220

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F56D2.6a.1 F56D2.6a.1 2475   III: 5589036-5591718