WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C05D2.5 Sequence Name  C05D2.5
Length (nt)  2109   Chromosome Location  III: 5604461-5604833
Chromosome . Primary Identifier  III Chromosome Location . Start  5604461
Chromosome Location . End  5604833
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D2.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26863 XND-1 78.3 702 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00039753
WBRNAi00039754
WBRNAi00022648
WBRNAi00007809
WBRNAi00010207
WBRNAi00113370
WBRNAi00005863
WBRNAi00077856
WBRNAi00113371
WBRNAi00085068
WBRNAi00085067

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C05D2.5 5604461 5604833 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001514 xnd-1 C05D2.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C05D2.5 5604461 5604833 1
CDS:C05D2.5 5604880 5605069 1
CDS:C05D2.5 5605120 5605211 1
CDS:C05D2.5 5605259 5605460 1
CDS:C05D2.5 5605550 5605796 1
CDS:C05D2.5 5606254 5606592 1
CDS:C05D2.5 5606637 5607218 1
CDS:C05D2.5 5607266 5607349 1

1 Sequence

Length
2109

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C05D2.5.1 C05D2.5.1 2317   III: 5604460-5607556