WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D2.1c.2 Sequence Name  C05D2.1c.2
Length (nt)  2576   Chromosome Location  III: 5625361-5632323
Chromosome . Primary Identifier  III Chromosome Location . Start  5625361
Chromosome Location . End  5632323 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D2.1c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000900 daf-4 C05D2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D2.1c C05D2.1c 1779   III: 5626667-5626714

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05D2.1c.2 5625361 5632323 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89349   134   III: 5625361-5625494 Caenorhabditis elegans
Exon89356   123   III: 5625863-5625985 Caenorhabditis elegans
Exon89362   108   III: 5626607-5626714 Caenorhabditis elegans
Exon89367   109   III: 5626764-5626872 Caenorhabditis elegans
Exon89374   63   III: 5628496-5628558 Caenorhabditis elegans
Exon89381   146   III: 5628669-5628814 Caenorhabditis elegans
Exon89388   108   III: 5628862-5628969 Caenorhabditis elegans
Exon89395   386   III: 5629461-5629846 Caenorhabditis elegans
Exon89402   701   III: 5630458-5631158 Caenorhabditis elegans
Exon89410   698   III: 5631626-5632323 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05D2.1c.2 5625361 5632323 1

1 Sequence

Length
2576

1 Sequence Ontology Term

Identifier Name Description
transcript