WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54E7.3b.3 Sequence Name  F54E7.3b.3
Length (nt)  4844   Chromosome Location  III: 5664356-5676795
Chromosome . Primary Identifier  III Chromosome Location . Start  5664356
Chromosome Location . End  5676795 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54E7.3b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003918 par-3 F54E7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54E7.3b F54E7.3b 4140   III: 5664372-5664539

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54E7.3b.3 5664356 5676795 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89448   184   III: 5664356-5664539 Caenorhabditis elegans
Exon89459   90   III: 5664946-5665035 Caenorhabditis elegans
Exon89467   63   III: 5665089-5665151 Caenorhabditis elegans
Exon89483   108   III: 5668754-5668861 Caenorhabditis elegans
Exon89491   148   III: 5668940-5669087 Caenorhabditis elegans
Exon89508   984   III: 5669551-5670534 Caenorhabditis elegans
Exon89524   1116   III: 5670732-5671847 Caenorhabditis elegans
Exon89540   147   III: 5672221-5672367 Caenorhabditis elegans
Exon89552   223   III: 5672472-5672694 Caenorhabditis elegans
Exon89567   262   III: 5673119-5673380 Caenorhabditis elegans
Exon89588   176   III: 5674721-5674896 Caenorhabditis elegans
Exon89604   655   III: 5675248-5675902 Caenorhabditis elegans
Exon89619   126   III: 5676056-5676181 Caenorhabditis elegans
Exon89640   562   III: 5676234-5676795 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54E7.3b.3 5664356 5676795 1

1 Sequence

Length
4844

1 Sequence Ontology Term

Identifier Name Description
transcript