WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54E7.3k.1 Sequence Name  F54E7.3k.1
Length (nt)  3993   Chromosome Location  III: 5664372-5675902
Chromosome . Primary Identifier  III Chromosome Location . Start  5664372
Chromosome Location . End  5675902 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54E7.3k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003918 par-3 F54E7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54E7.3k F54E7.3k 3993   III: 5664372-5664539

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54E7.3k.1 5664372 5675902 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89462   168   III: 5664372-5664539 Caenorhabditis elegans
Exon89470   90   III: 5664946-5665035 Caenorhabditis elegans
Exon89478   63   III: 5665089-5665151 Caenorhabditis elegans
Exon89494   108   III: 5668754-5668861 Caenorhabditis elegans
Exon89508   148   III: 5668940-5669087 Caenorhabditis elegans
Exon89525   984   III: 5669551-5670534 Caenorhabditis elegans
Exon89541   1116   III: 5670732-5671847 Caenorhabditis elegans
Exon89569   223   III: 5672472-5672694 Caenorhabditis elegans
Exon89578   262   III: 5673119-5673380 Caenorhabditis elegans
Exon89605   176   III: 5674721-5674896 Caenorhabditis elegans
Exon89621   655   III: 5675248-5675902 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54E7.3k.1 5664372 5675902 1

1 Sequence

Length
3993

1 Sequence Ontology Term

Identifier Name Description
transcript