WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54E7.3g.1 Sequence Name  F54E7.3g.1
Length (nt)  3903   Chromosome Location  III: 5668541-5675902
Chromosome . Primary Identifier  III Chromosome Location . Start  5668541
Chromosome Location . End  5675902 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54E7.3g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003918 par-3 F54E7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54E7.3g F54E7.3g 3903   III: 5668541-5668732

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54E7.3g.1 5668541 5675902 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89472   192   III: 5668541-5668732 Caenorhabditis elegans
Exon89497   148   III: 5668940-5669087 Caenorhabditis elegans
Exon89514   984   III: 5669551-5670534 Caenorhabditis elegans
Exon89530   1116   III: 5670732-5671847 Caenorhabditis elegans
Exon89546   147   III: 5672221-5672367 Caenorhabditis elegans
Exon89558   223   III: 5672472-5672694 Caenorhabditis elegans
Exon89569   262   III: 5673119-5673380 Caenorhabditis elegans
Exon89594   176   III: 5674721-5674896 Caenorhabditis elegans
Exon89610   655   III: 5675248-5675902 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54E7.3g.1 5668541 5675902 1

1 Sequence

Length
3903

1 Sequence Ontology Term

Identifier Name Description
transcript