WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54E7.3f.1 Sequence Name  F54E7.3f.1
Length (nt)  4519   Chromosome Location  III: 5668541-5676732
Chromosome . Primary Identifier  III Chromosome Location . Start  5668541
Chromosome Location . End  5676732 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54E7.3f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003918 par-3 F54E7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54E7.3f F54E7.3f 3894   III: 5668541-5668732

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54E7.3f.1 5668541 5676732 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89484   192   III: 5668541-5668732 Caenorhabditis elegans
Exon89503   148   III: 5668940-5669087 Caenorhabditis elegans
Exon89520   984   III: 5669551-5670534 Caenorhabditis elegans
Exon89536   1116   III: 5670732-5671847 Caenorhabditis elegans
Exon89552   147   III: 5672221-5672367 Caenorhabditis elegans
Exon89564   223   III: 5672472-5672694 Caenorhabditis elegans
Exon89584   253   III: 5673128-5673380 Caenorhabditis elegans
Exon89600   176   III: 5674721-5674896 Caenorhabditis elegans
Exon89616   655   III: 5675248-5675902 Caenorhabditis elegans
Exon89630   126   III: 5676056-5676181 Caenorhabditis elegans
Exon89640   499   III: 5676234-5676732 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54E7.3f.1 5668541 5676732 1

1 Sequence

Length
4519

1 Sequence Ontology Term

Identifier Name Description
transcript