WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54E7.8 Sequence Name  F54E7.8
Length (nt)  789   Chromosome Location  III: 5678062-5678267
Chromosome . Primary Identifier  III Chromosome Location . Start  5678062
Chromosome Location . End  5678267
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54E7.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26898 SKA-3 29.8 262 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00000793
WBRNAi00048354
WBRNAi00048355

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54E7.8 5678062 5678267 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018830 ska-3 F54E7.8 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54E7.8 5678062 5678267 -1
CDS:F54E7.8 5678314 5678601 -1
CDS:F54E7.8 5678645 5678825 -1
CDS:F54E7.8 5678875 5678988 -1

1 Sequence

Length
789

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54E7.8.1 F54E7.8.1 899   III: 5677969-5679005