WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0336.6.2 Sequence Name  B0336.6.2
Length (nt)  1568   Chromosome Location  III: 5690105-5692740
Chromosome . Primary Identifier  III Chromosome Location . Start  5690105
Chromosome Location . End  5692740 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0336.6.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015146 abi-1 B0336.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0336.6 B0336.6 1410   III: 5690229-5690389

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0336.6.2 5690105 5692740 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89672   285   III: 5690105-5690389 Caenorhabditis elegans
Exon89675   592   III: 5690874-5691465 Caenorhabditis elegans
Exon89677   442   III: 5691957-5692398 Caenorhabditis elegans
Exon89679   86   III: 5692445-5692530 Caenorhabditis elegans
Exon89681   163   III: 5692578-5692740 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0336.6.2 5690105 5692740 -1

1 Sequence

Length
1568

1 Sequence Ontology Term

Identifier Name Description
transcript