WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0336.7a.1 Sequence Name  B0336.7a.1
Length (nt)  1578   Chromosome Location  III: 5694729-5697366
Chromosome . Primary Identifier  III Chromosome Location . Start  5694729
Chromosome Location . End  5697366 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0336.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015147 B0336.7 B0336.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0336.7a B0336.7a 1506   III: 5694783-5695254

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0336.7a.1 5694729 5697366 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89692   526   III: 5694729-5695254 Caenorhabditis elegans
Exon89694   452   III: 5695700-5696151 Caenorhabditis elegans
Exon89696   209   III: 5696425-5696633 Caenorhabditis elegans
Exon89698   147   III: 5696765-5696911 Caenorhabditis elegans
Exon89700   217   III: 5697074-5697290 Caenorhabditis elegans
Exon89702   27   III: 5697340-5697366 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0336.7a.1 5694729 5697366 -1

1 Sequence

Length
1578

1 Sequence Ontology Term

Identifier Name Description
transcript