WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0336.2 Sequence Name  B0336.2
Length (nt)  546   Chromosome Location  III: 5716116-5716263
Chromosome . Primary Identifier  III Chromosome Location . Start  5716116
Chromosome Location . End  5716263
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0336.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE00696 ARF-1 20.5 181 Caenorhabditis elegans
 

Other

38 RNAi

WormBase ID
WBRNAi00085364
WBRNAi00098332
WBRNAi00024381
WBRNAi00008295
WBRNAi00109160
WBRNAi00028094
WBRNAi00080008
WBRNAi00062560
WBRNAi00001184
WBRNAi00083356
WBRNAi00109549
WBRNAi00080493
WBRNAi00002442
WBRNAi00002820
WBRNAi00038944
WBRNAi00062565
WBRNAi00080007
WBRNAi00087057
WBRNAi00087059
WBRNAi00087058
WBRNAi00079473
WBRNAi00079519
WBRNAi00079657
WBRNAi00079703
WBRNAi00079795
WBRNAi00079565
WBRNAi00079611
WBRNAi00079749
WBRNAi00109258
WBRNAi00087060

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0336.2 5716116 5716263 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000182 arf-1 B0336.2 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0336.2 5716116 5716263 1
CDS:B0336.2 5716337 5716447 1
CDS:B0336.2 5716547 5716755 1
CDS:B0336.2 5716841 5716918 1

1 Sequence

Length
546

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0336.2.2 B0336.2.2 1308   III: 5714886-5717586
Transcript:B0336.2.1 B0336.2.1 1173   III: 5716115-5717544