WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0244.8.1 Sequence Name  B0244.8.1
Length (nt)  1795   Chromosome Location  III: 5728180-5730159
Chromosome . Primary Identifier  III Chromosome Location . Start  5728180
Chromosome Location . End  5730159 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0244.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015083 egg-1 B0244.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0244.8 B0244.8 1656   III: 5728183-5728235

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0244.8.1 5728180 5730159 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89888   56   III: 5728180-5728235 Caenorhabditis elegans
Exon89889   82   III: 5728282-5728363 Caenorhabditis elegans
Exon89890   642   III: 5728408-5729049 Caenorhabditis elegans
Exon89891   712   III: 5729094-5729805 Caenorhabditis elegans
Exon89892   303   III: 5729857-5730159 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0244.8.1 5728180 5730159 1

1 Sequence

Length
1795

1 Sequence Ontology Term

Identifier Name Description
transcript