WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0244.6.1 Sequence Name  B0244.6.1
Length (nt)  1581   Chromosome Location  III: 5738008-5741554
Chromosome . Primary Identifier  III Chromosome Location . Start  5738008
Chromosome Location . End  5741554 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0244.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015081 B0244.6 B0244.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0244.6 B0244.6 1125   III: 5738008-5738121

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0244.6.1 5738008 5741554 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89932   114   III: 5738008-5738121 Caenorhabditis elegans
Exon89933   307   III: 5738464-5738770 Caenorhabditis elegans
Exon89934   131   III: 5739195-5739325 Caenorhabditis elegans
Exon89935   97   III: 5739375-5739471 Caenorhabditis elegans
Exon89936   92   III: 5739517-5739608 Caenorhabditis elegans
Exon89937   127   III: 5739727-5739853 Caenorhabditis elegans
Exon89938   164   III: 5740163-5740326 Caenorhabditis elegans
Exon89939   233   III: 5740379-5740611 Caenorhabditis elegans
Exon89942   316   III: 5741239-5741554 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0244.6.1 5738008 5741554 1

1 Sequence

Length
1581

1 Sequence Ontology Term

Identifier Name Description
transcript