WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0244.17.1 Sequence Name  B0244.17.1
Length (nt)  1059   Chromosome Location  III: 5733225-5735102
Chromosome . Primary Identifier  III Chromosome Location . Start  5733225
Chromosome Location . End  5735102 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0244.17.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00271715 B0244.17 B0244.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0244.17 B0244.17 1059   III: 5733225-5733320

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0244.17.1 5733225 5735102 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89942   96   III: 5733225-5733320 Caenorhabditis elegans
Exon89943   134   III: 5733383-5733516 Caenorhabditis elegans
Exon89944   170   III: 5733637-5733806 Caenorhabditis elegans
Exon89945   131   III: 5733986-5734116 Caenorhabditis elegans
Exon89946   94   III: 5734166-5734259 Caenorhabditis elegans
Exon89947   92   III: 5734411-5734502 Caenorhabditis elegans
Exon89948   127   III: 5734578-5734704 Caenorhabditis elegans
Exon89949   85   III: 5734793-5734877 Caenorhabditis elegans
Exon89950   76   III: 5734924-5734999 Caenorhabditis elegans
Exon89951   54   III: 5735049-5735102 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0244.17.1 5733225 5735102 1

1 Sequence

Length
1059

1 Sequence Ontology Term

Identifier Name Description
transcript