WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0244.16.1 Sequence Name  B0244.16.1
Length (nt)  1083   Chromosome Location  III: 5740966-5742822
Chromosome . Primary Identifier  III Chromosome Location . Start  5740966
Chromosome Location . End  5742822 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0244.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00271577 B0244.16 B0244.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0244.16 B0244.16 1083   III: 5740966-5741067

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0244.16.1 5740966 5742822 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89977   102   III: 5740966-5741067 Caenorhabditis elegans
Exon89978   307   III: 5741239-5741545 Caenorhabditis elegans
Exon89980   131   III: 5741861-5741991 Caenorhabditis elegans
Exon89981   94   III: 5742101-5742194 Caenorhabditis elegans
Exon89982   92   III: 5742244-5742335 Caenorhabditis elegans
Exon89983   218   III: 5742379-5742596 Caenorhabditis elegans
Exon89984   139   III: 5742684-5742822 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0244.16.1 5740966 5742822 1

1 Sequence

Length
1083

1 Sequence Ontology Term

Identifier Name Description
transcript